Publications

2014

Yao, G., "Modelling mammalian cellular quiescence.", Interface Focus, vol. 4, issue 3, pp. 20130074, 2014 Jun 06. PMCID: PMC3996586  PMID: 24904737
Buchan, J.R., "mRNP granules. Assembly, function, and connections with disease.", RNA Biol, vol. 11, issue 8, pp. 1019-30, 2014. PMCID: PMC4615263  PMID: 25531407
Sutphin, G. L., J. R. Delaney, and M. Kaeberlein, "Replicative life span analysis in budding yeast.", Methods Mol Biol, vol. 1205, pp. 341-57, 2014. PMID: 25213254
Mondal, D., E. Dougherty, A. Mukhopadhyay, A. Carbo, G. Yao, and J. Xing, "Systematic reverse engineering of network topologies: a case study of resettable bistable cellular responses.", PLoS One, vol. 9, issue 8, pp. e105833, 2014. PMCID: PMC4149494  PMID: 25170839
Holmes, W. M., B. K. Mannakee, R. N. Gutenkunst, and T. R. Serio, "Loss of amino-terminal acetylation suppresses a prion phenotype by modulating global protein folding.", Nat Commun, vol. 5, pp. 4383, 2014 Jul 15. PMCID: PMC4140192  PMID: 25023910
Dang, W., G. L. Sutphin, J. A. Dorsey, G. L. Otte, K. Cao, R. M. Perry, J. J. Wanat, D. Saviolaki, C. J. Murakami, S. Tsuchiyama, et al., "Inactivation of yeast Isw2 chromatin remodeling enzyme mimics longevity effect of calorie restriction via induction of genotoxic stress response.", Cell Metab, vol. 19, issue 6, pp. 952-66, 2014 Jun 03. PMCID: PMC4106248  PMID: 24814484
Srimani, J. K., G. Yao, J. Neu, Y. Tanouchi, T. Jun Lee, and L. You, "Linear population allocation by bistable switches in response to transient stimulation.", PLoS One, vol. 9, issue 8, pp. e105408, 2014. PMCID: PMC4139379  PMID: 25141235
Jilkine, A., and R. N. Gutenkunst, "Effect of dedifferentiation on time to mutation acquisition in stem cell-driven cancers.", PLoS Comput Biol, vol. 10, issue 3, pp. e1003481, 2014 Mar. PMCID: PMC3945168  PMID: 24603301
Robinson, J. D., A. J. Coffman, M. J. Hickerson, and R. N. Gutenkunst, "Sampling strategies for frequency spectrum-based population genomic inference.", BMC Evol Biol, vol. 14, pp. 254, 2014 Dec 04. PMCID: PMC4269862  PMID: 25471595
Wang, Y., Y. Wang, D. Li, L. Li, W. Zhang, G. Yao, Z. Jiang, and W. Zheng, "IMP3 signatures of fallopian tube: a risk for pelvic serous cancers.", J Hematol Oncol, vol. 7, pp. 49, 2014 Jul 12. PMCID: PMC4230642  PMID: 25014991
Veeramah, K. R., R. N. Gutenkunst, A. E. Woerner, J. C. Watkins, and M. F. Hammer, "Evidence for increased levels of positive and negative selection on the X chromosome versus autosomes in humans.", Mol Biol Evol, vol. 31, issue 9, pp. 2267-82, 2014 Sep. PMCID: PMC4137703  PMID: 24830675
Zheng, X., L. Jiang, J. Schroeder, A. Stopeck, and Y. Zohar, "Isolation of viable cancer cells in antibody-functionalized microfluidic devices.", Biomicrofluidics, vol. 8, issue 2, pp. 024119, 2014 Mar. PMCID: PMC4008759  PMID: 24803968
Aldrich, J. C., and K. A. Maggert, "Simple quantitative PCR approach to reveal naturally occurring and mutation-induced repetitive sequence variation on the Drosophila Y chromosome.", PLoS One, vol. 9, issue 10, pp. e109906, 2014. PMCID: PMC4186871  PMID: 25285439

2013

Smith, A. M., F. R. Adler, R. M. Ribeiro, R. N. Gutenkunst, J. L. McAuley, J. A. McCullers, and A. S. Perelson, "Kinetics of coinfection with influenza A virus and Streptococcus pneumoniae.", PLoS Pathog, vol. 9, issue 3, pp. e1003238, 2013 Mar. PMCID: PMC3605146  PMID: 23555251
Horton, N. C., S. O. Mathew, and P. A. Mathew, "Novel interaction between proliferating cell nuclear antigen and HLA I on the surface of tumor cells inhibits NK cell function through NKp44.", PLoS One, vol. 8, issue 3, pp. e59552, 2013. PMCID: PMC3602199  PMID: 23527218
Delaney, J. R., A. Chou, B. Olsen, D. Carr, C. Murakami, U. Ahmed, S. Sim, E. H. An, A. S. Castanza, M. Fletcher, et al., "End-of-life cell cycle arrest contributes to stochasticity of yeast replicative aging.", FEMS Yeast Res, vol. 13, issue 3, pp. 267-76, 2013 May. PMCID: PMC3960949  PMID: 23336757
Hart, M. R., H-Y. Su, D. Broka, A. Goverdhan, and J. A. Schroeder, "Inactive ERBB receptors cooperate with reactive oxygen species to suppress cancer progression.", Mol Ther, vol. 21, issue 11, pp. 1996-2007, 2013 Nov. PMCID: PMC3831044  PMID: 24081029
Kim, J. R., N. C. Horton, S. O. Mathew, and P. A. Mathew, "CS1 (SLAMF7) inhibits production of proinflammatory cytokines by activated monocytes.", Inflamm Res, vol. 62, issue 8, pp. 765-72, 2013 Aug. PMID: 23695528
Ma, X., S. Shah, M. Zhou, C. K. Park, V. H. Wysocki, and N. C. Horton, "Structural analysis of activated SgrAI-DNA oligomers using ion mobility mass spectrometry.", Biochemistry, vol. 52, issue 25, pp. 4373-81, 2013 Jun 25. PMCID: PMC6402485  PMID: 23742104
Buchan, J.R., R-M. Kolaitis, P. J Taylor, and R. Parker, "Eukaryotic stress granules are cleared by autophagy and Cdc48/VCP function.", Cell, vol. 153, issue 7, pp. 1461-74, 2013 Jun 20. PMCID: PMC3760148  PMID: 23791177
Chen, C., J. Li, G. Yao, S. K. Chambers, and W. Zheng, "Tubal origin of ovarian low-grade serous carcinoma.", Am J Clin Exp Obstet Gynecol, vol. 1, issue 1, pp. 13-36, 2013 Dec 15. PMCID: PMC4205570  PMID: 25346935
Delaney, J. R., C. Murakami, A. Chou, D. Carr, J. Schleit, G. L. Sutphin, E. H. An, A. S. Castanza, M. Fletcher, S. Goswami, et al., "Dietary restriction and mitochondrial function link replicative and chronological aging in Saccharomyces cerevisiae.", Exp Gerontol, vol. 48, issue 10, pp. 1006-13, 2013 Oct. PMCID: PMC3604125  PMID: 23235143
Horm, T. M., and J. A. Schroeder, "MUC1 and metastatic cancer: expression, function and therapeutic targeting.", Cell Adh Migr, vol. 7, issue 2, pp. 187-98, 2013 Mar-Apr. PMCID: PMC3954031  PMID: 23303343
Lyumkis, D., H. Talley, A. Stewart, S. Shah, C. K. Park, F. Tama, C. S. Potter, B. Carragher, and N. C. Horton, "Allosteric regulation of DNA cleavage and sequence-specificity through run-on oligomerization.", Structure, vol. 21, issue 10, pp. 1848-58, 2013 Oct 08. PMCID: PMC3898938  PMID: 24055317
Schleit, J., S. C. Johnson, C. F. Bennett, M. Simko, N. Trongtham, A. Castanza, E. J. Hsieh, R. M. Moller, B. M. Wasko, J. R. Delaney, et al., "Molecular mechanisms underlying genotype-dependent responses to dietary restriction.", Aging Cell, vol. 12, issue 6, pp. 1050-61, 2013 Dec. PMCID: PMC3838465  PMID: 23837470

Pages