Publications
2018
Das, A., S. Datta, E. Roche, S. Chaffee, E. Jose, L. Shi, K. Grover, S. Khanna, C. K. Sen, and S. Roy, "Novel mechanisms of Collagenase Santyl Ointment (CSO) in wound macrophage polarization and resolution of wound inflammation.", Sci Rep, vol. 8, issue 1, pp. 1696, 2018 01 26.
PMCID: PMC5786052 PMID: 29374192
Walker, S. I., W. Bains, L. Cronin, S. DasSarma, S. Danielache, S. Domagal-Goldman, B. Kacar, N. Y. Kiang, A. Lenardic, C. T. Reinhard, et al., "Exoplanet Biosignatures: Future Directions.", Astrobiology, vol. 18, issue 6, pp. 779-824, 2018 06.
PMCID: PMC6016573 PMID: 29938538
2017
Sutphin, G. L., G. Backer, S. Sheehan, S. Bean, C. Corban, T. Liu, M. J. Peters, J. B. J. van Meurs, J. M. Murabito, A. D. Johnson, et al., "Caenorhabditis elegans orthologs of human genes differentially expressed with age are enriched for determinants of longevity.", Aging Cell, vol. 16, issue 4, pp. 672-682, 2017 08.
PMCID: PMC5506438 PMID: 28401650
Aryanpur, P. P., C. A. Regan, J. M. Collins, T. M. Mittelmeier, D. M. Renner, A. M. Vergara, N. P. Brown, and T. A. Bolger, "Gle1 Regulates RNA Binding of the DEAD-Box Helicase Ded1 in Its Complex Role in Translation Initiation.", Mol Cell Biol, vol. 37, issue 21, 2017 Nov 01.
PMCID: PMC5640818 PMID: 28784717
Kacar, B., L. Guy, E. Smith, and J. Baross, "Resurrecting ancestral genes in bacteria to interpret ancient biosignatures.", Philos Trans A Math Phys Eng Sci, vol. 375, issue 2109, 2017 Dec 28.
PMCID: PMC5686408 PMID: 29133450
Liu, G., F. Pei, F. Yang, L. Li, A. Dipak Amin, S. Liu, J.R. Buchan, and W. C. Cho, "Role of Autophagy and Apoptosis in Non-Small-Cell Lung Cancer", Int J Mol Sci, vol. 18, issue 2, 2017 Feb 10.
PMCID: PMC5343902 PMID: 28208579
Auman, T., B. M. I. Vreede, A. Weiss, S. D. Hester, T. A. Williams, L. M. Nagy, and A. D. Chipman, "Dynamics of growth zone patterning in the milkweed bug Oncopeltus fasciatus.", Development, vol. 144, issue 10, pp. 1896-1905, 2017 May 15.
PMCID: PMC5450833 PMID: 28432218
Qi, X., H. An, A. P. Ragsdale, T. E. Hall, R. N. Gutenkunst, C. J Pires, and M. S. Barker, "Genomic inferences of domestication events are corroborated by written records in Brassica rapa.", Mol Ecol, vol. 26, issue 13, pp. 3373-3388, 2017 Jul.
PMID: 28371014
Dai, J., M. A. Miller, N. J. Everetts, X. Wang, P. Li, Y. Li, J-H. Xu, and G. Yao, "Elimination of quiescent slow-cycling cells via reducing quiescence depth by natural compounds purified from Ganoderma lucidum.", Oncotarget, vol. 8, issue 8, pp. 13770-13781, 2017 Feb 21.
PMCID: PMC5355137 PMID: 28099150
Mendenhall, A., M. M. Crane, S. Leiser, G. Sutphin, P. M. Tedesco, M. Kaeberlein, T. E. Johnson, and R. Brent, "Environmental Canalization of Life Span and Gene Expression in Caenorhabditis elegans.", J Gerontol A Biol Sci Med Sci, vol. 72, issue 8, pp. 1033-1037, 2017 Aug 01.
PMCID: PMC5861850 PMID: 28369388
Kwon, J. Sarah, N. J. Everetts, X. Wang, W. Wang, K. Della Croce, J. Xing, and G. Yao, "Controlling Depth of Cellular Quiescence by an Rb-E2F Network Switch.", Cell Rep, vol. 20, issue 13, pp. 3223-3235, 2017 Sep 26.
PMCID: PMC6571029 PMID: 28954237
Williams, T. A., and L. M. Nagy, "Linking gene regulation to cell behaviors in the posterior growth zone of sequentially segmenting arthropods.", Arthropod Struct Dev, vol. 46, issue 3, pp. 380-394, 2017 May.
PMID: 27720841
Ragsdale, A. P., and R. N. Gutenkunst, "Inferring Demographic History Using Two-Locus Statistics.", Genetics, vol. 206, issue 2, pp. 1037-1048, 2017 06.
PMCID: PMC5499162 PMID: 28413158
Garcia, A. K., W. J Schopf, S-I. Yokobori, S. Akanuma, and A. Yamagishi, "Reconstructed ancestral enzymes suggest long-term cooling of Earth's photic zone since the Archean.", Proc Natl Acad Sci U S A, vol. 114, issue 18, pp. 4619-4624, 2017 05 02.
PMCID: PMC5422769 PMID: 28416654
Miller, H., M. Fletcher, M. Primitivo, A. Leonard, G. L. Sutphin, N. Rintala, M. Kaeberlein, and S. F. Leiser, "Genetic interaction with temperature is an important determinant of nematode longevity.", Aging Cell, vol. 16, issue 6, pp. 1425-1429, 2017 12.
PMCID: PMC5676069 PMID: 28940623
Liu, G., A. N. Coyne, F. Pei, S. Vaughan, M. Chaung, D. C. Zarnescu, and J.R. Buchan, "Endocytosis regulates TDP-43 toxicity and turnover.", Nat Commun, vol. 8, issue 1, pp. 2092, 2017 12 12.
PMCID: PMC5727062 PMID: 29233983
Wang, X., K. Fujimaki, G. C. Mitchell, J. Sarah Kwon, K. Della Croce, C. Langsdorf, H. Helen Zhang, and G. Yao, "Exit from quiescence displays a memory of cell growth and division.", Nat Commun, vol. 8, issue 1, pp. 321, 2017 08 22.
PMCID: PMC5567331 PMID: 28831039
Lynch, M., R. Gutenkunst, M. Ackerman, K. Spitze, Z. Ye, T. Maruki, and Z. Jia, "Population Genomics of .", Genetics, vol. 206, issue 1, pp. 315-332, 2017 05.
PMCID: PMC5419477 PMID: 27932545
Liu, G., C. Lanham, J.R. Buchan, and M. E. Kaplan, "High-throughput transformation of Saccharomyces cerevisiae using liquid handling robots.", PLoS One, vol. 12, issue 3, pp. e0174128, 2017.
PMCID: PMC5358765 PMID: 28319150
Hsieh, PH., B. Hallmark, J. Watkins, T. M. Karafet, L. P. Osipova, R. N. Gutenkunst, and M. F. Hammer, "Exome Sequencing Provides Evidence of Polygenic Adaptation to a Fat-Rich Animal Diet in Indigenous Siberian Populations.", Mol Biol Evol, vol. 34, issue 11, pp. 2913-2926, 2017 Nov 01.
PMID: 28962010
Shats, I., M. Deng, A. Davidovich, C. Zhang, J. S. Kwon, D. Manandhar, R. Gordân, G. Yao, and L. You, "Expression level is a key determinant of E2F1-mediated cell fate.", Cell Death Differ, vol. 24, issue 4, pp. 626-637, 2017 04.
PMCID: PMC5384025 PMID: 28211871
2016
Greenwood, E., S. Maisel, D. Ebertz, A. Russ, R. Pandey, and J. Schroeder, "Llgl1 prevents metaplastic survival driven by epidermal growth factor dependent migration.", Oncotarget, vol. 7, issue 38, pp. 60776-60792, 2016 Sep 20.
PMCID: PMC5308616 PMID: 27542214
Coffman, A. J., P. Hsun Hsieh, S. Gravel, and R. N. Gutenkunst, "Computationally Efficient Composite Likelihood Statistics for Demographic Inference.", Mol Biol Evol, vol. 33, issue 2, pp. 591-3, 2016 Feb.
PMCID: PMC5854098 PMID: 26545922
Nagy, L., T. Heikkinen, A. Sackeyfio, and R. Pitman, "The Clinical Impact and Cost Effectiveness of Quadrivalent Versus Trivalent Influenza Vaccination in Finland.", Pharmacoeconomics, vol. 34, issue 9, pp. 939-51, 2016 Sep.
PMCID: PMC4980401 PMID: 27423657
Mannakee, B. K., and R. N. Gutenkunst, "Selection on Network Dynamics Drives Differential Rates of Protein Domain Evolution.", PLoS Genet, vol. 12, issue 7, pp. e1006132, 2016 07.
PMCID: PMC4933380 PMID: 27380265