Publications

2022

Lemke, M. D., and J. D. Woodson, "Targeted for destruction: degradation of singlet oxygen-damaged chloroplasts.", Plant Signal Behav, vol. 17, issue 1, pp. 2084955, 2022 12 31. PMCID: PMC9196835  PMID: 35676885

2021

Loganathan, S., H. E. Ball, E. Manzo, and D. C. Zarnescu, "Measuring Glucose Uptake in Drosophila Models of TDP-43 Proteinopathy.", J Vis Exp, issue 174, 2021 Aug 03. PMID: 34424253
Goldman, A. D., and B. Kacar, "Cofactors are Remnants of Life's Origin and Early Evolution.", J Mol Evol, 2021 Feb 06. PMID: 33547911
Bock, N. A., S. Charvet, J. Burns, Y. Gyaltshen, A. Rozenberg, S. Duhamel, and E. Kim, "Experimental identification and in silico prediction of bacterivory in green algae.", ISME J, 2021 Mar 02. PMID: 33649548
Hirshorn, S. T., N. Steele, and Y. Zavros, "Modeling pancreatic pathophysiology using genome editing of adult stem cell-derived and induced pluripotent stem cell (iPSC)-derived organoids.", Am J Physiol Gastrointest Liver Physiol, vol. 320, issue 6, pp. G1142-G1150, 2021 Jun 01. PMID: 33759566
Blawn, K. T., K. L. Kellohen, E. A. Galloway, J. Wahl, A. Vivek, V. G. Verkhovsky, N. K. Barker, K. E. Cottier, T. G. Vallecillo, P. R. Langlais, et al., "Sex hormones regulate NHE1 functional expression and brain endothelial proteome to control paracellular integrity of the blood endothelial barrier.", Brain Res, vol. 1763, pp. 147448, 2021 Jul 15. PMID: 33771519
Ahmed, N. S., L. M. Harrell, D. R. Wieland, M. A. Lay, V. F. Thompson, and J. C. Schwartz, "Fusion protein EWS-FLI1 is incorporated into a protein granule in cells.", RNA, 2021 May 25. PMID: 34035145
Pietikäinen, L. P., T. M Rahman, K. J Hiltunen, C. L. Dieckmann, and A. J. Kastaniotis, "Genetic dissection of the mitochondrial lipoylation pathway in yeast.", BMC Biol, vol. 19, issue 1, pp. 14, 2021 Jan 25. PMCID: PMC7831266  PMID: 33487163
Brown, N. P., A. M. Vergara, A. B. Whelan, P. Guerra, and T. A. Bolger, "Medulloblastoma-associated mutations in the DEAD-box RNA helicase DDX3X/DED1 cause specific defects in translation.", J Biol Chem, pp. 100296, 2021 Jan 15. PMID: 33460649
Lehmkuhl, E. M., S. Loganathan, E. Alsop, A. D. Blythe, T. Kovalik, N. P. Mortimore, D. Barrameda, C. Kueth, R. J. Eck, B. B. Siddegowda, et al., "TDP-43 proteinopathy alters the ribosome association of multiple mRNAs including the glypican Dally-like protein (Dlp)/GPC6.", Acta Neuropathol Commun, vol. 9, issue 1, pp. 52, 2021 03 24. PMCID: PMC7992842  PMID: 33762006
Baltrus, D., M. Clark, K. Hockett, M. Mollico, C. Smith, and S. Weaver, "Prophylactic Application of Tailocins Prevents Infection by Pseudomonas syringae.", Phytopathology, 2021 Jul 28. PMID: 34320833
Bearss, J. J., S. Kr Padi, N. Singh, M. Cardo-Vila, J. H. Song, G. Mouneimne, N. Fernandes, Y. Li, M. R. Harter, J. Mc Gard, et al., "EDC3 phosphorylation regulates growth and invasion through controlling P-body formation and dynamics.", EMBO Rep, pp. e50835, 2021 Feb 15. PMID: 33586867
Bakkar, N., A. Starr, B. E. Rabichow, I. Lorenzini, Z. T. McEachin, R. Kraft, M. Chaung, S. Macklin-Isquierdo, T. Wingfield, B. Carhart, et al., "The M1311V variant of ATP7A is associated with impaired trafficking and copper homeostasis in models of motor neuron disease.", Neurobiol Dis, vol. 149, pp. 105228, 2021 Feb. PMID: 33359139
Gutenkunst, R. N., "dadi.CUDA: Accelerating Population Genetics Inference with Graphics Processing Units.", Mol Biol Evol, 2021 Jan 22. PMID: 33480999
Bolger, M. S., J. B. Osness, J. S. Gouvea, and A. C. Cooper, "Supporting Scientific Practice through Model-Based Inquiry: A Students'-Eye View of Grappling with Data, Uncertainty, and Community in a Laboratory Experience.", CBE Life Sci Educ, vol. 20, issue 4, pp. ar59, 2021 12. PMID: 34678041
Garcia, A. K., C. M. Cavanaugh, and B. Kacar, "The curious consistency of carbon biosignatures over billions of years of Earth-life coevolution.", ISME J, 2021 Apr 12. PMID: 33846565
Lemke, M. D., K. E. Fisher, M. A. Kozlowska, D. W. Tano, and J. D. Woodson, "The core autophagy machinery is not required for chloroplast singlet oxygen-mediated cell death in the Arabidopsis thaliana plastid ferrochelatase two mutant.", BMC Plant Biol, vol. 21, issue 1, pp. 342, 2021 Jul 19. PMID: 34281507
Adam, Z. R., A. C. Fahrenbach, S. M. Jacobson, B. Kacar, and D. Yu Zubarev, "Radiolysis generates a complex organosynthetic chemical network.", Sci Rep, vol. 11, issue 1, pp. 1743, 2021 Jan 18. PMCID: PMC7813863  PMID: 33462313
McLaughlin, J. E., N. I. Darwish, J. Garcia-Sanchez, N. Tyagi, H. N. Trick, S. McCormick, R. Dill-Macky, and N. E. Tumer, "A Lipid Transfer Protein has Antifungal and Antioxidant Activity and Suppresses Fusarium Head Blight Disease and DON Accumulation in Transgenic Wheat.", Phytopathology, vol. 111, issue 4, pp. 671-683, 2021 Apr. PMID: 32896217
Koenig, S. N., H. C. Sucharski, E. Jose, E. K. Dudley, F. Madiai, O. Cavus, A. D. Argall, J. Williams, N. P. Murphy, C. Br Keith, et al., "Inherited Variants in SCARB1 Cause Severe Early-Onset Coronary Artery Disease.", Circ Res, 2021 May 12. PMID: 33975440
Carruthers, B. M., A. K. Garcia, A. Rivier, and B. Kacar, "Automated Laboratory Growth Assessment and Maintenance of Azotobacter vinelandii.", Curr Protoc, vol. 1, issue 3, pp. e57, 2021 Mar. PMID: 33656286
De Tarafder, A., N. Prasad Parajuli, S. Majumdar, B. Kacar, and S. Sanyal, "Kinetic Analysis Suggests Evolution of Ribosome Specificity in Modern Elongation Factor-Tus from 'Generalist' Ancestors.", Mol Biol Evol, 2021 Apr 19. PMID: 33871630

2020

Liu, B., Y. Shen, H. Huang, K. Della Croce, M. Wu, Y. Fan, Y. Liu, J. Xu, and G. Yao, "Curcumin derivative C212 inhibits Hsp90 and eliminates both growing and quiescent leukemia cells in deep dormancy.", Cell Commun Signal, vol. 18, issue 1, pp. 159, 2020 Sep 29. PMCID: PMC7523331  PMID: 32993709
Zarnescu, D. C., "Think globally, act locally: Centrosome-localized mRNAs ensure mitotic fidelity.", J Cell Biol, vol. 219, issue 12, 2020 Dec 07. PMCID: PMC7716381  PMID: 33216116
Fernandes, N., L. Nero, S. M. Lyons, P. Ivanov, T. M. Mittelmeier, T. A. Bolger, and J.R. Buchan, "Stress Granule Assembly Can Facilitate but Is Not Required for TDP-43 Cytoplasmic Aggregation.", Biomolecules, vol. 10, issue 10, 2020 Sep 25. PMCID: PMC7650667  PMID: 32992901

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