Publications
2011
Yao, G., C. Tan, M. West, J. R. Nevins, and L. You, "Origin of bistability underlying mammalian cell cycle entry.", Mol Syst Biol, vol. 7, pp. 485, 2011 Apr 26.
PMCID: PMC3101952 PMID: 21525871
Buchan, J.R., J-H. Yoon, and R. Parker, "Stress-specific composition, assembly and kinetics of stress granules in Saccharomyces cerevisiae.", J Cell Sci, vol. 124, issue Pt 2, pp. 228-39, 2011 Jan 15.
PMCID: PMC3010191 PMID: 21172806
Locke, D. P., LD. W. Hillier, W. C. Warren, K. C. Worley, L. V. Nazareth, D. M. Muzny, S-P. Yang, Z. Wang, A. T. Chinwalla, P. Minx, et al., "Comparative and demographic analysis of orang-utan genomes.", Nature, vol. 469, issue 7331, pp. 529-33, 2011 Jan 27.
PMCID: PMC3060778 PMID: 21270892
Zheng, X., L. Siu- Lun Cheung, J. A. Schroeder, L. Jiang, and Y. Zohar, "A high-performance microsystem for isolating circulating tumor cells.", Lab Chip, vol. 11, issue 19, pp. 3269-76, 2011 Oct 07.
PMCID: PMC6765387 PMID: 21837324
Skar, H., R. N. Gutenkunst, K. Wilbe Ramsay, A. Alaeus, J. Albert, and T. Leitner, "Daily sampling of an HIV-1 patient with slowly progressing disease displays persistence of multiple env subpopulations consistent with neutrality.", PLoS One, vol. 6, issue 8, pp. e21747, 2011.
PMCID: PMC3149046 PMID: 21829600
2010
Bitler, B. G., A. Goverdhan, and J. A. Schroeder, "MUC1 regulates nuclear localization and function of the epidermal growth factor receptor.", J Cell Sci, vol. 123, issue Pt 10, pp. 1716-23, 2010 May 15.
PMCID: PMC2864713 PMID: 20406885
Buchan, J.R., T. Nissan, and R. Parker, "Analyzing P-bodies and stress granules in Saccharomyces cerevisiae.", Methods Enzymol, vol. 470, pp. 619-40, 2010.
PMID: 20946828
Abecasis, G. R., D. Altshuler, A. Auton, L. D. Brooks, R. M. Durbin, R. A. Gibbs, M. E. Hurles, and G. A. McVean, "A map of human genome variation from population-scale sequencing.", Nature, vol. 467, issue 7319, pp. 1061-73, 2010 Oct 28.
PMCID: PMC3042601 PMID: 20981092
Horton, N. C., and C. K. Park, "Crystallization of zinc finger proteins bound to DNA.", Methods Mol Biol, vol. 649, pp. 457-77, 2010.
PMID: 20680852
Park, C. K., A. P. Stiteler, S. Shah, I. M Ghare, J. Bitinaite, and N. C. Horton, "Activation of DNA cleavage by oligomerization of DNA-bound SgrAI.", Biochemistry, vol. 49, issue 41, pp. 8818-30, 2010 Oct 19.
PMCID: PMC2972665 PMID: 20836535
Louderbough, J. M. V., J. I. Lopez, and J. A. Schroeder, "Matrix hyaluronan alters epidermal growth factor receptor-dependent cell morphology.", Cell Adh Migr, vol. 4, issue 1, pp. 26-31, 2010 Jan-Mar.
PMCID: PMC2852554 PMID: 20009574
Colvin, J., M. I. Monine, R. N. Gutenkunst, W. S. Hlavacek, D. D. Von Hoff, and R. G. Posner, "RuleMonkey: software for stochastic simulation of rule-based models.", BMC Bioinformatics, vol. 11, pp. 404, 2010 Jul 30.
PMCID: PMC2921409 PMID: 20673321
Flowers, M., J. A. Schroeder, A. D. Borowsky, D. G. Besselsen, C. A. Thomson, R. Pandey, and P. A. Thompson, "Pilot study on the effects of dietary conjugated linoleic acid on tumorigenesis and gene expression in PyMT transgenic mice.", Carcinogenesis, vol. 31, issue 9, pp. 1642-9, 2010 Sep.
PMCID: PMC2930807 PMID: 20624750
Lee, T. J., G. Yao, D. C. Bennett, J. R. Nevins, and L. You, "Stochastic E2F activation and reconciliation of phenomenological cell-cycle models.", PLoS Biol, vol. 8, issue 9, 2010 Sep 21.
PMCID: PMC2943438 PMID: 20877711
Alcázar-Román, A. R., T. A. Bolger, and S. R. Wente, "Control of mRNA export and translation termination by inositol hexakisphosphate requires specific interaction with Gle1.", J Biol Chem, vol. 285, issue 22, pp. 16683-92, 2010 May 28.
PMCID: PMC2878036 PMID: 20371601
Park, C. K., H. K. Joshi, A. Agrawal, I. M Ghare, E. J. Little, P. W. Dunten, J. Bitinaite, and N. C. Horton, "Domain swapping in allosteric modulation of DNA specificity.", PLoS Biol, vol. 8, issue 12, pp. e1000554, 2010 Dec 07.
PMCID: PMC2998434 PMID: 21151881
Bitler, B. G., and J. A. Schroeder, "Anti-cancer therapies that utilize cell penetrating peptides.", Recent Pat Anticancer Drug Discov, vol. 5, issue 2, pp. 99-108, 2010 Jun.
PMCID: PMC7485746 PMID: 19961434
2009
Mori, S., J. T. Chang, E. R. Andrechek, N. Matsumura, T. Baba, G. Yao, J. W. Kim, M. Gatza, S. Murphy, and J. R. Nevins, "Anchorage-independent cell growth signature identifies tumors with metastatic potential.", Oncogene, vol. 28, issue 31, pp. 2796-805, 2009 Aug 06.
PMCID: PMC3008357 PMID: 19483725
Gutenkunst, R. N., R. D. Hernandez, S. H. Williamson, and C. D. Bustamante, "Inferring the joint demographic history of multiple populations from multidimensional SNP frequency data.", PLoS Genet, vol. 5, issue 10, pp. e1000695, 2009 Oct.
PMCID: PMC2760211 PMID: 19851460
Bitler, B. G., I. Menzl, C. L. Huerta, B. Sands, W. Knowlton, A. Chang, and J. A. Schroeder, "Intracellular MUC1 peptides inhibit cancer progression.", Clin Cancer Res, vol. 15, issue 1, pp. 100-9, 2009 Jan 01.
PMCID: PMC2676873 PMID: 19118037
Nielsen, R., M. J. Hubisz, I. Hellmann, D. Torgerson, A. M. Andrés, A. Albrechtsen, R. Gutenkunst, M. D. Adams, M. Cargill, A. Boyko, et al., "Darwinian and demographic forces affecting human protein coding genes.", Genome Res, vol. 19, issue 5, pp. 838-49, 2009 May.
PMCID: PMC2675972 PMID: 19279335
Buchan, J.R., and R. Parker, "Eukaryotic stress granules: the ins and outs of translation.", Mol Cell, vol. 36, issue 6, pp. 932-41, 2009 Dec 25.
PMCID: PMC2813218 PMID: 20064460
Sutphin, G. L., and M. Kaeberlein, "Measuring Caenorhabditis elegans life span on solid media.", J Vis Exp, issue 27, 2009 May 12.
PMCID: PMC2794294 PMID: 19488025
Auton, A., K. Bryc, A. R. Boyko, K. E. Lohmueller, J. Novembre, A. Reynolds, A. Indap, M. H. Wright, J. D. Degenhardt, R. N. Gutenkunst, et al., "Global distribution of genomic diversity underscores rich complex history of continental human populations.", Genome Res, vol. 19, issue 5, pp. 795-803, 2009 May.
PMCID: PMC2675968 PMID: 19218534
Dunten, P. W., E. J. Little, and N. C. Horton, "The restriction enzyme SgrAI: structure solution via combination of poor MIRAS and MR phases.", Acta Crystallogr D Biol Crystallogr, vol. 65, issue Pt 4, pp. 393-8, 2009 Apr.
PMCID: PMC2659886 PMID: 19307723