Publications

2016

Eshleman, N., G. Liu, K. McGrath, R. Parker, and J.R. Buchan, "Defects in THO/TREX-2 function cause accumulation of novel cytoplasmic mRNP granules that can be cleared by autophagy.", RNA, vol. 22, issue 8, pp. 1200-14, 2016 08. PMCID: PMC4931113  PMID: 27251550
Sutphin, G. L., M. J Mahoney, K. Sheppard, D. O. Walton, and R. Korstanje, "WORMHOLE: Novel Least Diverged Ortholog Prediction through Machine Learning.", PLoS Comput Biol, vol. 12, issue 11, pp. e1005182, 2016 Nov. PMCID: PMC5094675  PMID: 27812085
Sanchez, J. L., Z. Romero, A. Quinones, K. R. Torgeson, and N. C. Horton, "DNA Binding and Cleavage by the Human Parvovirus B19 NS1 Nuclease Domain.", Biochemistry, vol. 55, issue 47, pp. 6577-6593, 2016 Nov 29. PMCID: PMC5933076  PMID: 27809499
Hsieh, PH., K. R. Veeramah, J. Lachance, S. A. Tishkoff, J. D. Wall, M. F. Hammer, and R. N. Gutenkunst, "Whole-genome sequence analyses of Western Central African Pygmy hunter-gatherers reveal a complex demographic history and identify candidate genes under positive natural selection.", Genome Res, vol. 26, issue 3, pp. 279-90, 2016 Mar. PMCID: PMC4772011  PMID: 26888263
Chen, C., P. Li, Y. Li, G. Yao, and J-H. Xu, "Antitumor effects and mechanisms of extracts and spores oil.", Oncol Lett, vol. 12, issue 5, pp. 3571-3578, 2016 Nov. PMCID: PMC5104053  PMID: 27900038
Constantinou, S. J., R. M. Pace, A. J. Stangl, L. M. Nagy, and T. A. Williams, "Wnt repertoire and developmental expression patterns in the crustacean Thamnocephalus platyurus.", Evol Dev, vol. 18, issue 5-6, pp. 324-341, 2016 Dec. PMID: 27696666
Leiser, S. F., G. Jafari, M. Primitivo, G. L. Sutphin, J. Dong, A. Leonard, M. Fletcher, and M. Kaeberlein, "Age-associated vulval integrity is an important marker of nematode healthspan.", Age (Dordr), vol. 38, issue 5-6, pp. 419-431, 2016 Dec. PMCID: PMC5266215  PMID: 27566309
Greenwood, E., S. Maisel, D. Ebertz, A. Russ, R. Pandey, and J. Schroeder, "Llgl1 prevents metaplastic survival driven by epidermal growth factor dependent migration.", Oncotarget, vol. 7, issue 38, pp. 60776-60792, 2016 Sep 20. PMCID: PMC5308616  PMID: 27542214
Coffman, A. J., P. Hsun Hsieh, S. Gravel, and R. N. Gutenkunst, "Computationally Efficient Composite Likelihood Statistics for Demographic Inference.", Mol Biol Evol, vol. 33, issue 2, pp. 591-3, 2016 Feb. PMCID: PMC5854098  PMID: 26545922
Glass, D. S., X. Jin, and I. H. Riedel-Kruse, "Nonlinear delay differential equations and their application to modeling biological network motifs", BMC Neurosci, vol. 17 Suppl 1, pp. 54, 2016 08 18. PMCID: PMC5001212  PMID: 27534393
Nagy, L., T. Heikkinen, A. Sackeyfio, and R. Pitman, "The Clinical Impact and Cost Effectiveness of Quadrivalent Versus Trivalent Influenza Vaccination in Finland.", Pharmacoeconomics, vol. 34, issue 9, pp. 939-51, 2016 Sep. PMCID: PMC4980401  PMID: 27423657
Mannakee, B. K., and R. N. Gutenkunst, "Selection on Network Dynamics Drives Differential Rates of Protein Domain Evolution.", PLoS Genet, vol. 12, issue 7, pp. e1006132, 2016 07. PMCID: PMC4933380  PMID: 27380265

2015

McCormick, M. A., J. R. Delaney, M. Tsuchiya, S. Tsuchiyama, A. Shemorry, S. Sim, A. Chia- Zong Chou, U. Ahmed, D. Carr, C. J. Murakami, et al., "A Comprehensive Analysis of Replicative Lifespan in 4,698 Single-Gene Deletion Strains Uncovers Conserved Mechanisms of Aging.", Cell Metab, vol. 22, issue 5, pp. 895-906, 2015 Nov 03. PMCID: PMC4862740  PMID: 26456335
Horton, N. C., and P. A. Mathew, "NKp44 and Natural Cytotoxicity Receptors as Damage-Associated Molecular Pattern Recognition Receptors.", Front Immunol, vol. 6, pp. 31, 2015. PMCID: PMC4313717  PMID: 25699048
Vermulst, M., A. S. Denney, M. J. Lang, C-W. Hung, S. Moore, A. M Moseley, W. J Thompson, V. Madden, J. Gauer, K. J. Wolfe, et al., "Corrigendum: Transcription errors induce proteotoxic stress and shorten cellular lifespan.", Nat Commun, vol. 6, pp. 8738, 2015 Oct 14. PMID: 26465398
Shah, S., P. Dunten, A. Stiteler, C. K. Park, and N. C. Horton, "Structure and specificity of FEN-1 from Methanopyrus kandleri.", Proteins, vol. 83, issue 1, pp. 188-94, 2015 Jan. PMCID: PMC4270939  PMID: 25354467
Deans, C., and K. A. Maggert, "What do you mean, "epigenetic"?", Genetics, vol. 199, issue 4, pp. 887-96, 2015 Apr. PMCID: PMC4391566  PMID: 25855649
Peters, M. J., R. Joehanes, L. C. Pilling, C. Schurmann, K. N. Conneely, J. Powell, E. Reinmaa, G. L. Sutphin, A. Zhernakova, K. Schramm, et al., "The transcriptional landscape of age in human peripheral blood.", Nat Commun, vol. 6, pp. 8570, 2015 Oct 22. PMCID: PMC4639797  PMID: 26490707
Hermansen, R. A., B. K. Mannakee, W. Knecht, D. A. Liberles, and R. N. Gutenkunst, "Characterizing selective pressures on the pathway for de novo biosynthesis of pyrimidines in yeast.", BMC Evol Biol, vol. 15, pp. 232, 2015 Oct 28. PMCID: PMC4625875  PMID: 26511837
Aldrich, J. C., and K. A. Maggert, "Transgenerational inheritance of diet-induced genome rearrangements in Drosophila.", PLoS Genet, vol. 11, issue 4, pp. e1005148, 2015 Apr. PMCID: PMC4401788  PMID: 25885886
Chandler-Brown, D., H. Choi, S. Park, B. R. Ocampo, S. Chen, A. Le, G. L. Sutphin, L. S. Shamieh, E. D. Smith, and M. Kaeberlein, "Sorbitol treatment extends lifespan and induces the osmotic stress response in Caenorhabditis elegans.", Front Genet, vol. 6, pp. 316, 2015. PMCID: PMC4621483  PMID: 26579191
Vermulst, M., A. S. Denney, M. J. Lang, C-W. Hung, S. Moore, A. M Moseley, A. M. Mosely, W. J Thompson, W. J. Thompson, V. Madden, et al., "Transcription errors induce proteotoxic stress and shorten cellular lifespan.", Nat Commun, vol. 6, pp. 8065, 2015 Aug 25. PMCID: PMC4684168  PMID: 26304740
Pandya, S., T. J. Struck, B. K. Mannakee, M. Paniscus, and R. N. Gutenkunst, "Testing whether metazoan tyrosine loss was driven by selection against promiscuous phosphorylation.", Mol Biol Evol, vol. 32, issue 1, pp. 144-52, 2015 Jan. PMCID: PMC4271526  PMID: 25312910
Zhang, W., L. Wei, L. Li, B. Yang, B. Kong, G. Yao, and W. Zheng, "Ovarian serous carcinogenesis from tubal secretory cells.", Histol Histopathol, vol. 30, issue 11, pp. 1295-302, 2015 Nov. PMID: 26174492
Shah, S., J. Sanchez, A. Stewart, M. M. Piperakis, R. Cosstick, C. Nichols, C. K. Park, X. Ma, V. Wysocki, J. Bitinaite, et al., "Probing the run-on oligomer of activated SgrAI bound to DNA.", PLoS One, vol. 10, issue 4, pp. e0124783, 2015. PMCID: PMC4399878  PMID: 25880668

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